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Satya Nandivada

ICSB Presentation
ICSB Conference

About Me

I’m a Machine Learning Engineer and Computational Systems Biology researcher building scalable, high-impact intelligent systems at the intersection of deep learning, graph modeling, and scRNA-seq, with hands-on experience in PyTorch, Transformers, and GNNs. I built DeepOMAPNet, a multimodal framework that predicts surface protein expression from RNA using kNN cell graphs, Graph Attention Networks, and Transformer-based fusion, enhanced with cross-modal attention, graph positional encoding, and efficiency optimizations like sparsification and mixed precision to scale training and inference. I also develop end-to-end pipelines for AML subtype classification and build hybrid mechanistic + learning models (e.g., UDEs) to study drug response and resistance, with a focus on delivering reliable, interpretable, real-world impact.

Skills & Technologies

Technologies and tools I work with to bring ideas to life.

Frontend

āš›ļøReact
ā–²Next.js
šŸ“˜TypeScript
🟨JavaScript
šŸŽØTailwind CSS

Backend

šŸPython
🟢Node.js
šŸ“ŠR
🐘PostgreSQL
šŸš€Express

AI/ML Tools

🧠TensorFlow
šŸ”„PyTorch
ā˜ļøAWS
🐳Docker
šŸ“Git

Research

šŸ”¬Single-cell Analysis
🧬Bioinformatics
šŸ¤–Machine Learning
šŸ“ˆData Visualization
āš•ļøPrecision Medicine

Achievements & Recognition

Milestones and accomplishments in my career journey

šŸ„

MaineHealth Innovation Lab Demo Day Invitation

MaineHealth Innovation

Recognition

Invited as a distinguished guest and innovation expert to provide constructive feedback and mentorship at the Spring Innovation Cohort Demo Day. Recognized for expertise in innovation and pitching, bringing diversity of thought to healthcare innovation solutions.

June 2024

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šŸ”¬

ICSB 2024 Conference Poster Presentation

International Conference on Systems Biology

Research

Presented research on 'DeepOMAPNet: Multimodal Graph-based Prediction of Surface Proteins' at the International Conference on Systems Biology 2024. Engaged with the global systems biology community to discuss AI applications in multi-omics.

October 2024

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Get In Touch

Let's Work Together

I'm always interested in new opportunities and exciting projects. Whether you have a question or just want to say hi, I'll try my best to get back to you!

sreesatyanandivada@gmail.com
San Francisco, CA